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Image Search Results
Journal: Nature Communications
Article Title: Hypoxia induces HIF1α-dependent epigenetic vulnerability in triple negative breast cancer to confer immune effector dysfunction and resistance to anti-PD-1 immunotherapy
doi: 10.1038/s41467-022-31764-9
Figure Lengend Snippet: a Heatmap showing Pearson’s correlation between hypoxic signature genes expression and immune-related genes expression in basal TNBC samples ( n = 98) in TCGA dataset. b Scatter plots (upper panel) and Pearson’s correlation coefficients (lower panel) showing the expression of hypoxic gene signatures and immune-related genes in breast cancers in TCGA dataset (Basal, n = 98; HER2, n = 58; Luminal A, n = 231; Luminal B, n = 129). Regression lines with a 95% confidence interval (gray fill) are shown in the scatter plots. c Images of fluorescent staining of human TNBC samples. Scale bar, 50 µm. Data were representative of 30 independent experiments. d Quantification of infiltrating IFNγ + CD8 + T cell number in HIF1α − and HIF1α + regions of human TNBC sample ( n = 30). P values were determined with paired two-tailed t -test. e Correlation between infiltrating IFNγ + CD8 + T cell count and HIF1α fluorescent intensity in human TNBC samples ( n = 30). The simple linear regression R 2 and P values (two-tailed) are calculated. Dot plot is shown with regression line and 95% confidence interval. f Representative images of fluorescent staining of mouse 4T1 tumor samples. Scale bar, 50 µm. Data represents three independent experiments. g Flow cytometry (left panel) demonstrating the gating strategy of activated-PIM high (H) and activated-PIM low (L) populations in living cells dissociated from 4T1 tumors. The CD8 + T cell percentage and IFNγ expression in CD8 + T cells was quantified (right panel, n = 6). Data were presented as box and whiskers, with median value and whiskers of minimum and maximum values. P values were determined with an unpaired two-tailed t -test. h Kaplan–Meier overall survival (OS) and distant metastasis-free survival (DMFS) analysis of the indicated gene signatures in TNBC patients. The publicly available data used in Fig. 1a, b are available in the TCGA database under accession code BRCA.exp.547.med.txt [ https://gdc.cancer.gov/about-data/publications/brca_2012 ]. The publicly available data used in h are available in the KM-Plotter-Breast Cancer [ https://kmplot.com/analysis/index.php?p=service&cancer=breast ]. For the remaining data, source data are provided in Source Data file.
Article Snippet: The following antibodies were used for staining, anti-activated pimonidazole FITC antibody (Hypoxyprobe, CAT# HP2-200kit, dilution 1:200), anti-mouse HIF1α APC antibody (R&D Systems, CAT# IC1935A, dilution 1:50), anti-mouse CD3 BV421 antibody (BD Biosciences, CAT# 564008, dilution 1:100), anti-mouse CD45 Percp-Vio700 antibody (Miltenyi Biotec, CAT# 130-110-663, dilution 1:100)
Techniques: Expressing, Staining, Two Tailed Test, Cell Counting, Flow Cytometry
Journal: Nature Communications
Article Title: Hypoxia induces HIF1α-dependent epigenetic vulnerability in triple negative breast cancer to confer immune effector dysfunction and resistance to anti-PD-1 immunotherapy
doi: 10.1038/s41467-022-31764-9
Figure Lengend Snippet: a Schematic graph demonstrating the coculture model. b Representative flow cytograms (upper panel) gated from human pan-T cell culture and quantification (lower panel, n = 3) of differentiated CD8 + T cell subtypes: Tn (naïve T cells), Tcm (central memory T cells), Tem (effector memory T cells), Teff (effector T cells). c Schematic graph demonstrating the normoxia (20% O 2 ) and hypoxia (1% O 2 ) culture condition of T cells coculturing with human TNBC cell line. d Heatmap of the differentially expressed genes (DEGs) in hypoxic cultured human T cells compared to normoxia group. DEGs were identified in edgeR (|logFC| > 1, adjusted P < 0.01). P values were adjusted using Benjamini–Hochberg method in edgeR. DEGs identified in the indicated GO gene clusters are marked in the heatmap. e GSEA analysis of human T cells in hypoxic versus normoxic conditions. Analysis was based on ranked logFC from edgeR. FDR and adjusted p value are shown in the graph. P values were adjusted using Benjamini–Hochberg method in GSEA analysis. f Flow cytometry quantifications of immune effector molecules and exhaustion markers in CD8 + T cells gated from human pan-T cells cultured under the indicated conditions ( n = 4). g Representative flow cytograms of PD-1 and TIM-3 expression in CD8 + T cells gated from human pan-T cells culture. h Flow cytometric quantification of terminally exhausted T cells (PD-1 + TIM-3 + ) in CD8 + T cells gated from human pan-T cells culture ( n = 3). i Flow cytometric quant i fication of proliferating cells (Ki76 + ) in CD8 + and CD4 + T cells gated from human T cells cocultured with TNBC ( n = 3). All flow cytometry data ( b , f , h , and i ) are presented as the mean ± SD of samples from three to four donors. For all flow cytometry data, P values were determined by one-way ANOVA ( f , h ) or two-way ANOVA ( b ) with Turkey’s test, or paired two-tailed t -test ( i ). Raw RNA-seq data i s available in the GEO database with accession number GSE179885 . For the remaining data, source data are provided in Source Data file.
Article Snippet: The following antibodies were used for staining, anti-activated pimonidazole FITC antibody (Hypoxyprobe, CAT# HP2-200kit, dilution 1:200), anti-mouse HIF1α APC antibody (R&D Systems, CAT# IC1935A, dilution 1:50), anti-mouse CD3 BV421 antibody (BD Biosciences, CAT# 564008, dilution 1:100), anti-mouse CD45 Percp-Vio700 antibody (Miltenyi Biotec, CAT# 130-110-663, dilution 1:100)
Techniques: Cell Culture, Flow Cytometry, Expressing, Two Tailed Test, RNA Sequencing
Journal: Nature Communications
Article Title: Hypoxia induces HIF1α-dependent epigenetic vulnerability in triple negative breast cancer to confer immune effector dysfunction and resistance to anti-PD-1 immunotherapy
doi: 10.1038/s41467-022-31764-9
Figure Lengend Snippet: a RT-qPCR analysis assessing IFNG expression in T/NK cells in an epigenetic-drug screening. Both T cells and NK cells were cultured under 1% O 2 with indicated treatments. Data were presented as the log2 fold change of IFNG mRNA level normalized to vehicle control, mean ± SD of technical triplicates, representative of two independent experiments ( n = 2). b , c Representative histograms (left panel) and flow cytometric quantifications (right panel) of IFNγ expression in human CD8 + T cells ( b n = 4) and NK cells ( c n = 3) with indicated treatments. Quantification data were presented as the mean ± SD of samples from three to four donors. P values were determined by two-way ANOVA with Turkey’s test. d ChIP-qPCR analysis of HDAC1, HDAC2, HDAC3, EZH2, and SUZ12 occupancy on IFNG promoter of human T cells. Four primers were designed to span the promoters of IFNG , with P1 at −1448 to −1354b, P2 at −707 to −628b, P3 at −257 to −171b, P4 at +350 to +461b, relative to TSS. For ChIP analysis of EZH2 and SUZ12 occupancy, RPL30 serves as the negative control and CCND2 as the positive control. e , f ChIP-qPCR analysis of H3K27ac and H3K27me3 enrichment on IFNG promoter of human T cells under indicated conditions. All ChIP-qPCR data ( d – f ) are presented as fold enrichment relative to IgG and expressed as mean ± SD of technical triplicates, representative of two independent experiments ( n = 2). For ChIP-qPCR data of d , e , statistics were performed to analyze bindings of indicated markers across different sites in IFNG promoter ( RPL30 and CCND2 excluded) between hypoxia and normoxia. P values were determined by two-way ANOVA analysis. g RT-qPCR analysis of human T cell with indicated gene knockdown. Data were presented as the fold change of mRNA level normalized to the control group under normoxia (1% O2), mean ± SD of technical triplicates, representative of two independent experiments ( n = 2). Source data are provided as a source data file.
Article Snippet: The following antibodies were used for staining, anti-activated pimonidazole FITC antibody (Hypoxyprobe, CAT# HP2-200kit, dilution 1:200), anti-mouse HIF1α APC antibody (R&D Systems, CAT# IC1935A, dilution 1:50), anti-mouse CD3 BV421 antibody (BD Biosciences, CAT# 564008, dilution 1:100), anti-mouse CD45 Percp-Vio700 antibody (Miltenyi Biotec, CAT# 130-110-663, dilution 1:100)
Techniques: Quantitative RT-PCR, Expressing, Drug discovery, Cell Culture, Control, ChIP-qPCR, Negative Control, Positive Control, Knockdown
Journal: Nature Communications
Article Title: Hypoxia induces HIF1α-dependent epigenetic vulnerability in triple negative breast cancer to confer immune effector dysfunction and resistance to anti-PD-1 immunotherapy
doi: 10.1038/s41467-022-31764-9
Figure Lengend Snippet: a ChIP-qPCR analysis of HIF1α and HIF2α occupancy on IFNG promoter in human T cells. VEGFA served as a positive control. b Co-immunoprecipitation shows the physical interaction between HDAC1 and HIF1α, and the interaction between HDAC1 and SUZ12 in human T cells. Data is representative of two independent experiments ( n = 2). c Representative western blot images ( n = 2) to demonstrate knockdown of HIF1α in human T cells. d ChIP-qPCR analysis of HDAC1 occupancy on IFNG promoter in human T cells. e ChIP-qPCR analysis of H3K27ac and H3K27me3 enrichment on IFNG promoter in human T cells with indicated treatments. All ChIP-qPCR data ( a , d , e ) are presented as fold enrichment relative to IgG and expressed as mean ± SD of technical triplicates, representative of two independent experiments ( n = 2). For ChIP-qPCR data of a , statistics were performed to analyze bindings of indicated markers across different sites in IFNG promoter ( VEGFA excluded) between hypoxia and normoxia. P values were determined by two-way ANOVA analysis. f Flow cytometric quantifications of IFNγ in CD8 + T cells gated from human pan-T cells cultured under the indicated conditions. Data were presented as the mean ± SD of three independent experiments ( n = 3). P values were determined by one-way ANOVA with Turkey’s test. g Representative western blot images ( n = 2) to demonstrate the inhibition of HIF1α level by indicated compounds in human T cells. h Representative histograms (left panel) and flow cytometric quantifications (right panel) of IFNγ expression in human CD8 + T cells with indicated treatments. Quantification data were presented as the mean ± SD of samples from four donors ( n = 4). P values were determined by two-way ANOVA with Turkey’s test. Source data are provided as a source data file.
Article Snippet: The following antibodies were used for staining, anti-activated pimonidazole FITC antibody (Hypoxyprobe, CAT# HP2-200kit, dilution 1:200), anti-mouse HIF1α APC antibody (R&D Systems, CAT# IC1935A, dilution 1:50), anti-mouse CD3 BV421 antibody (BD Biosciences, CAT# 564008, dilution 1:100), anti-mouse CD45 Percp-Vio700 antibody (Miltenyi Biotec, CAT# 130-110-663, dilution 1:100)
Techniques: ChIP-qPCR, Positive Control, Immunoprecipitation, Western Blot, Knockdown, Cell Culture, Inhibition, Expressing
Journal: Nature Communications
Article Title: Hypoxia induces HIF1α-dependent epigenetic vulnerability in triple negative breast cancer to confer immune effector dysfunction and resistance to anti-PD-1 immunotherapy
doi: 10.1038/s41467-022-31764-9
Figure Lengend Snippet: a Cell lysis of TNBC cells cocultured with human T cells from two different healthy donors. Human T cells were stimulated with TNBC cell lysate-primed DC cells. Data were presented as mean ± SD of three independent experiments ( n = 3). P values were determined by two-way ANOVA. b Western blot analysis of IFNγ–regulated proteins in TNBC cells cocultured with human T cells. Data were representative of two independent experiments ( n = 2). c Cell lysis of TNBC cells cocultured with human T cells. Human T cells were stimulated with TNBC cell lysate-primed DC cells and pretreated with indicated compounds. Data presented as mean ± SD of three independent experiments ( n = 3). P values were determined by one-way ANOVA with Dunnett’s test. d Western blot analysis of IFNγ–regulated proteins in TNBC cells cocultured with human T cells. Human T cells were stimulated with TNBC cell lysate-primed DC cells and pretreated with indicated compounds. Data were representative of two independent experiments ( n = 2). e Cell lysis of TNBC cells cocultured with human T cells. Data were presented as mean ± SD of three independent experiments ( n = 3). P values were determined by two-way ANOVA with Dunnett’s test. f Flow cytometric quantifications of immune effector molecules in human CD8 + T cells cultured under the indicated conditions. Data were presented as the mean ± SD of samples from three donors ( n = 3). P values were determined by two-way ANOVA with Turkey’s test. Source data are provided as a source data file.
Article Snippet: The following antibodies were used for staining, anti-activated pimonidazole FITC antibody (Hypoxyprobe, CAT# HP2-200kit, dilution 1:200), anti-mouse HIF1α APC antibody (R&D Systems, CAT# IC1935A, dilution 1:50), anti-mouse CD3 BV421 antibody (BD Biosciences, CAT# 564008, dilution 1:100), anti-mouse CD45 Percp-Vio700 antibody (Miltenyi Biotec, CAT# 130-110-663, dilution 1:100)
Techniques: Lysis, Western Blot, Cell Culture
Journal: Nature Communications
Article Title: Hypoxia induces HIF1α-dependent epigenetic vulnerability in triple negative breast cancer to confer immune effector dysfunction and resistance to anti-PD-1 immunotherapy
doi: 10.1038/s41467-022-31764-9
Figure Lengend Snippet: a Schematic diagram showing the establishment of humanized mice (humice) with human immune system reconstituted in NIKO mice. The presence of human CD45 + cells, NK cells, CD4 + and CD8 + T cells in the mice’s peripheral system was validated by flow cytometry. b Primary LM2 tumor size in humice (control, n = 14; Keytruda, n = 14; ENT, n = 12; PX478, n = 14; ENT + Keytruda, n = 16; PX478 + Keytruda, n = 16) and NIKO mice (control, n = 10; ENT + Keytruda, n = 10; PX478 + Keytruda, n = 10), at Day 21 of treatments. c Lung metastasis of humice (control, n = 6; Keytruda, n = 6; ENT, n = 6; PX478, n = 6; ENT + Keytruda, n = 7; PX478 + Keytruda, n = 7) and NIKO mice (control, n = 5; ENT + Keytruda, n = 5; PX478 + Keytruda, n = 5) bearing LM2 tumors at Day 35 assessed by bioluminescence (BLI) measurement. d Representative bioluminescence (BLI) images showing the lung metastasis of humice and NIKO mice. e Flow cytometric analysis of LM2 tumors harvested from humanized mice. IFNγ, TNFα, and granzyme B expression was examined in tumor-infiltrating human CD8 + T cells and NK cells. N = 5 for each group. f Flow cytometry analysis of LM2 tumors harvested from humanized mice. Expressions of human PD-L1 and PD-L2 were examined in total living cells dissociated from LM2 tumors. N = 5 for each group. Quantification data of flow cytometry ( e , f ) are presented as a box and whiskers, with median values and whiskers of minimum and maximum values. Data for b and c were presented as mean ± SD . P values were determined by one-way ( e , f ) or two-way ( b , c ) ANOVA with Turkey’s test. Source data are provided as a source data file.
Article Snippet: The following antibodies were used for staining, anti-activated pimonidazole FITC antibody (Hypoxyprobe, CAT# HP2-200kit, dilution 1:200), anti-mouse HIF1α APC antibody (R&D Systems, CAT# IC1935A, dilution 1:50), anti-mouse CD3 BV421 antibody (BD Biosciences, CAT# 564008, dilution 1:100), anti-mouse CD45 Percp-Vio700 antibody (Miltenyi Biotec, CAT# 130-110-663, dilution 1:100)
Techniques: Flow Cytometry, Control, Expressing
Journal: The Journal of Clinical Investigation
Article Title: Asparagine drives immune evasion in bladder cancer via RIG-I stability and type I IFN signaling
doi: 10.1172/JCI186648
Figure Lengend Snippet: ( A ) HEK293T cells were transfected with Flag-RIG-I and HA-CBL and cultured in complete medium (Comp) and medium added Asn (1 mM) for 48 hours, followed by coimmunoprecipitation and immunoblotting analysis with the indicated antibodies. ( B ) Flag-RIG-I–overexpressed HEK293T cells were cultured in complete medium (Comp) or medium added Asn (1 mM), and those cotransfected with a control and HA-CBL overexpression plasmid for 48 hours, followed by coimmunoprecipitation and immunoblotting analysis with the indicated antibodies. ( C ) Purified Flag-RIG-I proteins were incubated with the indicated proteins in the presence or absence of 1 mM Asn for 2 hours. Mixtures were analyzed by Western blot. ( D ) MST measurement of the interaction between Asn and purified RIG-I. Kd value was automatically by the curve fitting. ( E ) MST measurement of the interaction between Asn and purified CBL. ( F ) Western blot of the indicated proteins in MBT2 cells cultured in complete medium (Comp) or medium added Asn (1 mM), and those cotransfected with si-NC, si-Cbl#1 or si-Cbl#2. ( G ) qRT-PCR revealed the expression levels of Ifn-β and Ccl5 in MBT2 cells cultured in complete medium (Comp) or medium added Asn (1 mM), and those cotransfected with si-NC, si-Cbl#1, or si-Cbl#2. ( H ) Tumor growth curves and tumor weight of immunocompetent C3H mice ( n = 6) injected subcutaneously with indicated MBT2 cells. ( I ) Tumor infiltrating CD8 + T cells from transplanted MBT2 tumors ( n = 6) in C3H mice were analyzed by flow cytometry. Data were mean ± SD. Statistical significance was calculated by 2-way ANOVA for G – I . * P < 0.05, ** P < 0.01, *** P < 0.001.
Article Snippet: To evaluate the role of CD8 + T cells in mice, the 200 μg of
Techniques: Transfection, Cell Culture, Western Blot, Control, Over Expression, Plasmid Preparation, Purification, Incubation, Quantitative RT-PCR, Expressing, Injection, Flow Cytometry
Journal: The Journal of Clinical Investigation
Article Title: Asparagine drives immune evasion in bladder cancer via RIG-I stability and type I IFN signaling
doi: 10.1172/JCI186648
Figure Lengend Snippet: ( A ) Tumor growth and tumor weight in immunocompetent C57BL/6 mice injected subcutaneously with MB49 cells stably transfected with scramble and shAsns#1 and treated with anti-PD-1 or isotype control ( n = 6). ( B ) Flow cytometry showed the tumor infiltrating CD8 + T cells in MB49 tumors of indicated groups. ( C – E ) Schematic of ASNase therapy. Tumor growth and tumor weight in immunocompetent C57BL/6 mice injected subcutaneously with MB49 cells administrated with ASNase, and treated with anti-PD-1 or isotype control ( n = 5). ( F ) Tumor infiltrating CD8 + T cells in MB49 tumors of indicated groups were analyzed by flow cytometry. ( G ) The body weights among different groups during experimental procedure. ( H ) Tumor image and tumor weight in immunocompetent C3H mice injected subcutaneously with MBT2 cells administrated with ASNase, and treated with anti-PD-1 or isotype control ( n = 6). ( I ) Representative luminescence images and histogram analysis of bioluminescence intensity in C57BL/6 mice injected orthotopically with luc-labeled MB49 cells with the treatment of ASNase and anti-PD-1 antibody. ( J ) Representative H&E staining and immunofluorescence for CD8 of tumors in the indicated groups. Scale bars (H&E): 1 mm. Scale bars (IF): 40 μm. Data were mean ± SD. Statistical significance was calculated by 2-way ANOVA for A , B , D , E , F , H , and I . * P < 0.05, ** P < 0.01, *** P < 0.001.
Article Snippet: To evaluate the role of CD8 + T cells in mice, the 200 μg of
Techniques: Injection, Stable Transfection, Transfection, Control, Flow Cytometry, Labeling, Staining, Immunofluorescence
Journal: The Journal of Clinical Investigation
Article Title: Asparagine drives immune evasion in bladder cancer via RIG-I stability and type I IFN signaling
doi: 10.1172/JCI186648
Figure Lengend Snippet: ( A ) mRNA levels of ASNS in bladder cancer samples from TCGA cohort. ( B ) Western blot showed the expression levels of ASNS in our paired samples of bladder cancer. ( C ) Representative IHC staining and quantification revealed ASNS expression in paired samples of bladder cancer from our cohort ( n = 40). Scale bar: 50 μm. ( D ) Kaplan-Meier analysis of the overall survival of 40 patients with high or low expression of ASNS. ( E ) Representative IHC staining of ASNS, RIG-I, and CD8 in bladder cancer samples from our cohort. ( F ) Correlation analysis of ASNS expression and CD8 expression in bladder cancer clinical samples ( n = 40). ( G ) Representative MRI image for patients with response and nonresponse after ICI treatment in our hospital (301-immune cohort, n = 57). ( H ) The relationship between ASNS expression level and immunotherapy efficacy in the 301-immune cohort. ( I ) Disease-free survival of patients with different ASNS IHC scores in our immune cohort. ( J ) Representative multicolor IF images for ASNS (red), RIG-I (yellow), CD8 (green), and DAPI (blue) in patients in the response and nonresponse groups. Scale bars: 50 μm. Data were mean ± SD. Statistical significance was calculated by 2-tailed unpaired Student’s t tests for A ; Paired Student’s t-tests for C ; Chi-square test for H ; Survival analysis of D and I was performed by the log-rank test. *** P < 0.001.
Article Snippet: To evaluate the role of CD8 + T cells in mice, the 200 μg of
Techniques: Western Blot, Expressing, Immunohistochemistry
Journal: Acta Pharmaceutica Sinica. B
Article Title: Arsenic trioxide-based nanoparticles for enhanced chemotherapy by activating pyroptosis
doi: 10.1016/j.apsb.2025.08.003
Figure Lengend Snippet: Immunomodulatory effects of AsMn/Dz@BSA-FA. Analysis of the proportion of (A) CD11c + CD86 + cells, (B) CD3 + CD4 + cells, and (C) CD3 + CD8 + cells in tumor tissues of each group of mice using flow cytometry. (D) Immunofluorescence detection of changes in CD86, CD11c, CD8, and CD4 in tumor tissue after treatment with different formulations, Scale bar: 100 μm. (E) Expression levels of CD86, CD8, and CD4 in tumor tissue after treatment with different formulations. Changes in (F) TNF- α and (G)IL-6 levels in tumor tissue after treatment with different formulations. Data are presented as mean ± SD ( n = 5). ∗∗ P < 0.01, ∗∗∗ P < 0.001, ∗∗∗∗ P < 0.0001.
Article Snippet: APC Anti-Mouse CD11c Antibody, PE Anti-Mouse CD86 Antibody, FITC Anti-Mouse CD3 Antibody, APC Anti-Mouse CD4 Antibody,
Techniques: Flow Cytometry, Immunofluorescence, Expressing
Journal: Nature Communications
Article Title: p140Cap inhibits β-Catenin in the breast cancer stem cell compartment instructing a protective anti-tumor immune response
doi: 10.1038/s41467-023-37824-y
Figure Lengend Snippet: a Effect of p140Cap over-expression on tumor growth and metastasis in TuBo and 4T1 BC cell models. TuBo (10 5 ) or 4T1 (10 4 ) mock and p140Cap cells were inoculated into the fat pad of 8-weeks-old female BALB/c mice. Tumor growth was monitored and tumor size was measured every two days from tumor onset (TuBo, n = 11; 4T1, n = 5; data are represented for n = x mices, two-tailed unpaired t test). For metastasis analysis in TuBo mock and p140Cap tumor-bearing mice, tumors were surgically removed when they reached 10 mm diameter and mice were kept alive. After 5 weeks, mice were sacrified and lungs were explanted and analyzed. For metastasis analysis of 4T1 mock and p140Cap tumors-bearing mice, lungs were analyzed 22 and 30 days post-injection for mock and p140Cap cells, respectively. Representative dot plots show the number of lung metastasis as mean ± SEM (Standard Error of the Mean; TuBo, n = 5; 4T1, n = 10; 2way ANOVA). b , c Flow cytometry analysis for M1- and M2-macrophages, CD4 + and CD8 + T-Lymphocytes, Natural Killer cells in tumor-bearing mice. Representative dot plots show the percentage (%) of tumor infiltrated M1- and M2-macrophages, CD4 + and CD8 + T-Lymphocytes, Natural Killer (NK) cells, normalized on CD45 + cells in TuBo mock and p140Cap tumor-bearing mice in panel ( b ) ( n = 8/M1, CD4 + and CD8 + and n = 9/NK, n = 5/M2) and 4T1 mock and p140Cap tumor-bearing mice in panel ( c ) ( n = 5/group). Data are represented for n = x mice as mean ± SEM; two-tailed unpaired t test). For TuBo mock and p140Cap tumors, the analysis was performed at day 26 or 32, respectively, while for 4T1 mock and p140Cap tumors at day 12. d Flow cytometry analysis for PMN-MDSCs (CD11b + Ly6G + Ly6C low ) and for M-MDSCs (CD11b + Ly6G − Ly6C + ) normalized on CD45 + cells, in tumor-bearing mice. Representative dot plots show the percentage of tumor infiltrated PMN-MDSCs and M-MDSCs cells in TuBo and 4T1 mock and p140Cap tumor-bearing mice, as described in panels ( b , c ) (TuBo n = 8/group; 4T1 n = 7/PMN-MDSCs and n = 8/M-MDSCs). Data are represented for n = x mice as mean ± SEM; two-tailed unpaired t test.
Article Snippet: The following antibodies were used (at a dilution of 1:200): CD45-VioGreen (Cat#130-110-803), CD11b-FITC (Cat#130-110-803), Ly6G-VioBlue (Cat#130-119-986), Ly6C-APC-Vio770 (Cat#130-121-439), F4/80-PE-Vio770 (Cat#130-118-320), MHC-II-APC (Cat#130-102-139), CD3-FITC (Cat#130-119-135), CD4-APC-Vio770 (Cat#130-119-134),
Techniques: Over Expression, Two Tailed Test, Injection, Flow Cytometry
Journal: Pharmacological research
Article Title: USP19 deficiency enhances T-cell-mediated antitumor immunity by promoting PD-L1 degradation in colorectal cancer.
doi: 10.1016/j.phrs.2025.107668
Figure Lengend Snippet: Fig. 5. PD-L1 reconstitution reverses USP19 deficiency-induced antitumor immunity. A, B PD-L1 reconstituted in USP19 depletion RKO cells was co-cultured with activated T cells for 48 hours, crystal violet (A) and CCK-8 (B) showed that PD-L1 reconstituted promoted RKO cell viability. C, D Annexin V-FITC and pro- pidium iodide (PI) apoptosis assays showed that PD-L1 reconstituted reversed the apoptosis ratio mediated by USP19 deficiency. E Western blot analysis showed that PD-L1 reconstituted reversed the cleaved caspase-3 protein expression mediated by USP19 deficiency. F-H Flow cytometry revealed that PD-L1 reconstitution reversed the USP19 deficiency-induced increase in the secretion of IFN-γ and GzmB by CD8+ T cells. Data in (B, D, G, H) are shown as mean ± SD. Statistical significance was assessed using one-way and two-way ANOVA (*p < 0.05, **p < 0.01, ***p < 0.001).
Article Snippet: GAPDH (cat# AC002, ABclonal), USP19 (cat# 25768–1-AP, Proteinch), Myc (cat# M192–3, MBL), PD-L1 (cat# 28076–1-AP, Proteinch), HA (cat# M180–3, MBL), Flag (cat #M185–3L, MBL), Lymphocyte separation medium (cat# 7111012, Dakewe), PE/Cyanine7 anti-human CD8a (cat# 300914, BioLegend), FITC anti-human CD3 (cat# 300306, BioLegend), APC anti-human IFN-γ (cat# 502512, BioLegend), Brilliant Violet 421TM anti-human/mouse Granzyme B Recombinant (cat# 396414, BioLegend), Zombie AquaTM Fixable Viability Kit (cat# 423101,BioLegend), Brefeldin A Solution (1,000X) (cat# 420601, BioLegend), Fixation Buffer (cat# 420801, BioLegend), Intracellular Staining Perm Wash Buffer (10X) (cat# 421002, BioLegend), Rat IgG2b isotype control-InVivo (cat# A2116, selleck), InVivcMAb anti-mouse PD-L1 (cat# 10 F.9G2, BioXCell), FITC Anti-Mouse CD4 Antibody [GK1.5] (cat# E-AB-F1097C, Elabscience), PerCP/Cyanine5.5 Anti-Mouse CD3 Antibody (cat# E-AB-F1013J, Elabscience), PE AntiMouse CD3 Antibody [17A2] (cat# E-AB-F1013D, Elabscience),
Techniques: Cell Culture, CCK-8 Assay, Western Blot, Expressing, Flow Cytometry
Journal: Heliyon
Article Title: Erzhi pills reverse PD-L1-mediated immunosuppression in melanoma microenvironment
doi: 10.1016/j.heliyon.2024.e24988
Figure Lengend Snippet: EZP increased the percentage of CD4 + T cells and enhanced the function of CD8 + T in vivo . (A–D) T cells were analyzed by flow cytometry. (A) The gate strategy for CD4 + and CD8 + T cells. Flow cytometry plots (B) and bar graphs present percentages of CD3 + CD4 + T cells (C) and CD3 + CD8 + T cells (D) in the spleen from each group mice. n = 5. (E–H) IHC staining for the tumor tissues. IHC images (E) and quantifications of CD4 + T cells (F), CD8 + T cells (G) and GZMB + cells (H) in tumor tissues. Scale bar, 100 μm. n = 3. Data are expressed as mean ± SD. * P < 0.05, ** P < 0.01 and *** P < 0.001 vs DMSO. IHC, immunohistochemistry; GZMB, granzyme B.
Article Snippet: PerCP/Cyanine5.5 anti-mouse CD3 antibody (E-AB-F1013J),
Techniques: In Vivo, Flow Cytometry, Immunohistochemistry
Journal: Frontiers in Medicine
Article Title: Analysis and prediction of immune cell infiltration characteristics in COPD: Folium isatidis and its active ingredients are able to combat lung lesions caused by COPD by correcting immune cell infiltration
doi: 10.3389/fmed.2025.1584411
Figure Lengend Snippet: IDR and FI modulated changes in immune cell infiltration caused by COPD. Flow cytometric analysis of (A) CD4 + T lymphocytes, (B) CD8 + T lymphocytes, (C) Treg cells, (D) MDSCs, (E) B lymphocytes, (F) NK cells, and (G) Eos. Proportion of (H) CD4 + T lymphocytes, (I) CD8 + T lymphocytes. (J) CD4/CD8 index. Proportion of (K) Treg cells, (L) MDSCs, (M) B lymphocytes, (N) NK cells, and (O) Eos. Data were expressed as mean ± SD, ### p < 0.001 vs. CON group, * p < 0.05, ** p < 0.01, and *** p < 0.001 vs. MOD group ( n = 3).
Article Snippet: The Anti-Mouse antibodies CD3-APC (E-AB-F1013E), CD4-FITC (E-AB-F1097C),
Techniques:
Journal: CytoJournal
Article Title: The mechanism of prostaglandin E2 upregulation of programmed death ligand 1 expression promoting immune escape in non-small cell lung cancer
doi: 10.25259/Cytojournal_129_2025
Figure Lengend Snippet: PGE2 upregulates PD-L1 expression in NSCLC and promotes immune escape response. (a-c) PD-L1 expression detected after PTGES overexpression (OE-PTGES) and knockdown (sh-PTGES), compared with respective negative controls (OE-NC or sh-NC). (d and e) Cytotoxicity tested by LDH kit assay after PTGES overexpression (OE-PTGES) and knockdown (sh-PTGES), compared with respective negative controls (OE-NC or sh-NC). (f and g) CD8 + T cell viability tested after PTGES overexpression (OE-PTGES) and knockdown (sh-PTGES), compared with respective negative controls (OE-NC or sh-NC). (h and i) CD8 + T cell apoptosis examined after PTGES overexpression (OE-PTGES) and knockdown (sh-PTGES), compared with respective negative controls (OE-NC or sh-NC). (j-m) IFN-γ, TNF-α, granzyme B, and perforin quantification by ELISA after PTGES overexpression (OE-PTGES) and knockdown (sh-PTGES), compared with respective negative controls (OE-NC or sh-NC). n = 6; ✶ P < 0.05, ✶ ✶ P < 0.01, ✶ ✶ ✶ P < 0.001. PEG2: Prostaglandin E2, PD-L1: Programmed death ligand 1, NSCLC: Non-small cell lung cancer, PTGES: Prostaglandin E synthase, OE-NC: Overexpression negative control, sh-NC: Short hairpin negative control, LDH: Lactate dehydrogenase, OE-PTGES: Overexpression prostaglandin E synthase, sh-PTGES: Short hairpin prostaglandin E synthase, IFN-γ: Interferon-gamma, TNF-α: Tumor necrosis factor-alpha, ELISA: Enzyme-linked immunosorbent assay.
Article Snippet: First, a single-cell suspension was prepared and incubated with CD3 (E-AB-F1013E, Elabscience, Wuhan, China) and
Techniques: Expressing, Over Expression, Knockdown, Enzyme-linked Immunosorbent Assay, Negative Control
Journal: CytoJournal
Article Title: The mechanism of prostaglandin E2 upregulation of programmed death ligand 1 expression promoting immune escape in non-small cell lung cancer
doi: 10.25259/Cytojournal_129_2025
Figure Lengend Snippet: PGE2 promotes immune escape in NSCLC in vivo by upregulating PD-L1 expression. (a) Isolated tumor images after PTGES overexpression and knockout. (b and c) Changes in tumor weight and volume after PTGES overexpression and knockout (significant difference markers marked with ✶ represent OE-NC versus OE-PTGES, and those marked with # represent sh-NC vs. sh-PTGES). (d-f) WB analysis of PTGES and PD-L1 after PTGES overexpression and knockout in vivo . (g and h) IHC analysis of CD8 after PTGES overexpression and knockout in vivo (scale bar: 20 μm, magnification, 400×). (i-l) IFN-γ, TNF-α, granzyme B, and perforin quantification by ELISA after PTGES overexpression and knockout in vivo . n = 5; ✶ P < 0.05, ✶ ✶ P < 0.01, ✶ ✶ ✶ P < 0.001, ## P < 0.01. OE-NC: Overexpression negative control, sh-NC: Short hairpin negative control. PEG2: Prostaglandin E2, PD-L1: Programmed death ligand 1, NSCLC: Non-small cell lung cancer, PTGES: Prostaglandin E synthase, OE-NC: Overexpression negative control, sh-NC: Short hairpin negative control, OE-PTGES: Overexpression prostaglandin E synthase, sh-PTGES: Short hairpin prostaglandin E synthase, IHC: Immunohistochemistry, IFN-γ: Interferon-gamma, TNF-α: Tumor necrosis factor-alpha, ELISA: Enzyme-linked immunosorbent assay.
Article Snippet: First, a single-cell suspension was prepared and incubated with CD3 (E-AB-F1013E, Elabscience, Wuhan, China) and
Techniques: In Vivo, Expressing, Isolation, Over Expression, Knock-Out, Enzyme-linked Immunosorbent Assay, Negative Control, Immunohistochemistry